LOCUS pDONR™/Zeo DISCLAIMER Certain terms are trademarks or registered trademarks of Invitrogen Corporation. See "Intellectual Property" in the Help file for more information. FEATURES Location/Qualifiers misc_feature complement(268..295) /note="rrnB T2 transcription termination sequence (c)" misc_feature complement(427..470) /note="rrnB T1 transcription termination sequence (c)" primer_bind 537..552 /note="M13 Forward (-20) priming site" misc_recomb 570..668 /label=attL1 /note="attL1" misc_recomb complement(2309..2405) /label=attL2 /note="attL2 (c)" misc_signal complement(2420..2439) /note="T7 Promoter/priming site (c)" primer_bind 2447..2463 /note="M13 Reverse priming site" gene 2576..3385 /note="Kanamycin resistance gene" rep_origin 3506..4179 /note="pUC origin" vector join(2317..4182,1..651) /source="pDONR%99221" /type="Donor Vector" misc_feature 669..691 /note="TEV site" source 692..2302 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:44629 IMAGE:5301536" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 692..2302 /gene="GALNTL6" /gene_synonym=GALNT17 /db_xref="GeneID:442117" /db_xref="HGNC:33844" CDS 692..2302 /dnas_title="UDP-N-acetyl-alpha-D-galactosamine:polypeptid e N-acetylgalactosaminyltransferase-like 6" /gene="GALNTL6" /gene_synonym=GALNT17 /codon_start=1 /product="UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6" /protein_id="AAH47551.1" /db_xref="GI:71297071" /db_xref="GeneID:442117" /db_xref="HGNC:33844" /translation="MKRKQKRFLQMTLLFTVALIFLPNVGLWSLYKDKHLVKSAEPGE QQTFPLGLGDGQFYSWTDGLRRKDWHDYESIQKEAMRSRKGEHGKPYPLTEEDHDDSA YRENGFNIFVSNNIALERSLPDIRHANCKHKMYLERLPNTSIIIPFHNEGWTSLLRTI HSIINRTPGSLIAEIILVDDFSEREHLKDKLEEYMARFSKVRIVRTKKREGLIRTRLL GASMARGEVLTFLDSHCEVNVNWLPPLLNQIPLNHKTIVCPMIDVIDHNHFGYEAQAG DAMRGAFDWEMYYKRIPIPPELQRADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGL EIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRKYVPYKVPSGTSLARNLKRVAETW MDEFAEYIYQRRPEYRHLSTGDISAQKELRKQLKCKDFKWFMAAVAWDVPKYYPPVEP PPAAWGEIRNVAANLCVDSKHGATGTELRLDICVKDGSERTWSHEQLFTFGWREDIRP GEPLHTRKFCFDAISHNSPVTLYDCHGMKGNQLWGYRKDRTLFHPVSNSCMDCNHAEK KIFMARCDPLSETQQWIFEHINMTVLEKFNHHANS" misc_difference 746..746 /gene="GALNTL6" /gene_synonym=GALNT17 /note="'A' in cDNA is 'G' in the human genome; amino acid difference: 'R' in cDNA, 'G' in the human genome. The chimpanzee genome agrees with the human genomic sequence and not the cDNA." misc_feature 692..2302 /note="GALNTL6 coding region" misc_difference 1247..1247 /gene="GALNTL6" /gene_synonym=GALNT17 /note="'C' in cDNA is 'G' in the human genome; amino acid difference: 'P' in cDNA, 'A' in the human genome. The chimpanzee genome agrees with the human genomic sequence and not the cDNA." misc_difference 2187..2187 /gene="GALNTL6" /gene_synonym=GALNT17 /note="'A' in cDNA is 'C' in the human genome; amino acid difference: 'H' in cDNA, 'P' in the human genome. The chimpanzee genome agrees with the human genomic sequence and not the cDNA." ORIGIN 1 CTTTCCTGCG TTATCCCCTG ATTCTGTGGA TAACCGTATT ACCGCCTTTG AGTGAGCTGA 61 TACCGCTCGC CGCAGCCGAA CGACCGAGCG CAGCGAGTCA GTGAGCGAGG AAGCGGAAGA 121 GCGCCCAATA CGCAAACCGC CTCTCCCCGC GCGTTGGCCG ATTCATTAAT GCAGCTGGCA 181 CGACAGGTTT CCCGACTGGA AAGCGGGCAG TGAGCGCAAC GCAATTAATA CGCGTACCGC 241 TAGCCAGGAA GAGTTTGTAG AAACGCAAAA AGGCCATCCG TCAGGATGGC CTTCTGCTTA 301 GTTTGATGCC TGGCAGTTTA TGGCGGGCGT CCTGCCCGCC ACCCTCCGGG CCGTTGCTTC 361 ACAACGTTCA AATCCGCTCC CGGCGGATTT GTCCTACTCA GGAGAGCGTT CACCGACAAA 421 CAACAGATAA AACGAAAGGC CCAGTCTTCC GACTGAGCCT TTCGTTTTAT TTGATGCCTG 481 GCAGTTCCCT ACTCTCGCGT TAACGCTAGC ATGGATGTTT TCCCAGTCAC GACGTTGTAA 541 AACGACGGCC AGTCTTAAGC TCGGGCCCCA AATAATGATT TTATTTTGAC TGATAGTGAC 601 CTGTTCGTTG CAACACATTG ATGAGCAATG CTTTTTTATA ATGCCAACTT TGTACAAAAA 661 AGCAGGCTct gaaaacttgt actttcaagg cagaagaaag gactggcatg actatgaaag 721 cattcagaaa gaggctatgc gctcaaggaa aggtgaacat gggaaacctt acccccttac 781 tgaagaggac catgatgact cagcttacag ggaaaatggt tttaatattt tcgtcagcaa 841 caatattgct ctagagaggt ctctgccaga tattcgtcat gctaactgta agcataagat 901 gtatctggaa aggctgccaa acaccagcat cattatccca tttcataatg aaggttggac 961 ttcactcctg cggaccatac acagtataat taaccgaacc ccagggagtc tgatagcaga 1021 aatcattcta gtagatgact tcagtgagag agaacacctg aaggataaat tggaagaata 1081 catggcccga ttttccaaag tgaggattgt tcgcaccaag aaaagagaag gactcatccg 1141 gacccgtctc ctgggggcat ctatggccag aggagaagtc ctgacattcc tggactccca 1201 ctgcgaggtc aatgtgaact ggctgccccc actcctcaac caaattccac taaaccacaa 1261 aaccatcgtg tgtcccatga tcgatgtcat tgaccacaat cacttcgggt atgaggcaca 1321 agctggggat gccatgcgag gagccttcga ctgggaaatg tactacaaaa gaatccccat 1381 ccctccagag ctccagaggg cagatcccag cgaccctttt gagtctcctg ttatggctgg 1441 aggtctcttt gctgtggatc ggaaatggtt ttgggaattg ggtggctatg atccaggttt 1501 agaaatctgg ggaggagaac agtatgaaat ctcttttaag gtttggatgt gtggaggaga 1561 aatgtttgat gttccatgtt ctagagttgg tcatatctac aggaagtacg ttccatacaa 1621 agttccatct gggacaagcc tggcaagaaa cctgaagcgg gtagctgaga cctggatgga 1681 tgaatttgcc gagtacattt accagcggcg gccggagtac aggcatctct ccacggggga 1741 catctctgcc cagaaggagc tgcgcaagca gctcaagtgc aaggacttca aatggttcat 1801 ggctgctgtg gcctgggacg tgcctaaata ctaccctcca gtggagcccc cgcctgctgc 1861 ctggggggag atccgaaatg tggcagcaaa tctctgtgtg gacagcaagc atggagccac 1921 cggaacagag ctgaggctgg acatctgtgt caaggatggt tctgaaagaa catggtctca 1981 tgaacagctt tttacctttg gatggagaga agatattcga cccggtgagc cactgcatac 2041 ccggaaattc tgctttgatg cgatctcaca caacagcccc gttacactct atgactgtca 2101 tggcatgaag gggaaccagc tctggggata ccggaaggac agaacattat tccatcctgt 2161 gagcaacagc tgcatggatt gcaaccacgc agagaagaag attttcatgg ccagatgtga 2221 ccctctctct gagactcagc agtggatttt tgaacacatt aatatgactg ttttagaaaa 2281 atttaaccac catgccaact ccTAGGACCC AGCTTTCTTG TACAAAGTTG GCATTATAAG 2341 AAAGCATTGC TTATCAATTT GTTGCAACGA ACAGGTCACT ATCAGTCAAA ATAAAATCAT 2401 TATTTGCCAT CCAGCTGATA TCCCCTATAG TGAGTCGTAT TACATGGTCA TAGCTGTTTC 2461 CTGGCAGCTC TGGCCCGTGT CTCAAAATCT CTGATGTTAC ATTGCACAAG ATAAAATAAT 2521 ATCATCATGA ACAATAAAAC TGTCTGCTTA CATAAACAGT AATACAAGGG GTGTTATGAG 2581 CCATATTCAA CGGGAAACGT CGAGGCCGCG ATTAAATTCC AACATGGATG CTGATTTATA 2641 TGGGTATAAA TGGGCTCGCG ATAATGTCGG GCAATCAGGT GCGACAATCT ATCGCTTGTA 2701 TGGGAAGCCC GATGCGCCAG AGTTGTTTCT GAAACATGGC AAAGGTAGCG TTGCCAATGA 2761 TGTTACAGAT GAGATGGTCA GACTAAACTG GCTGACGGAA TTTATGCCTC TTCCGACCAT 2821 CAAGCATTTT ATCCGTACTC CTGATGATGC ATGGTTACTC ACCACTGCGA TCCCCGGAAA 2881 AACAGCATTC CAGGTATTAG AAGAATATCC TGATTCAGGT GAAAATATTG TTGATGCGCT 2941 GGCAGTGTTC CTGCGCCGGT TGCATTCGAT TCCTGTTTGT AATTGTCCTT TTAACAGCGA 3001 TCGCGTATTT CGTCTCGCTC AGGCGCAATC ACGAATGAAT AACGGTTTGG TTGATGCGAG 3061 TGATTTTGAT GACGAGCGTA ATGGCTGGCC TGTTGAACAA GTCTGGAAAG AAATGCATAA 3121 ACTTTTGCCA TTCTCACCGG ATTCAGTCGT CACTCATGGT GATTTCTCAC TTGATAACCT 3181 TATTTTTGAC GAGGGGAAAT TAATAGGTTG TATTGATGTT GGACGAGTCG GAATCGCAGA 3241 CCGATACCAG GATCTTGCCA TCCTATGGAA CTGCCTCGGT GAGTTTTCTC CTTCATTACA 3301 GAAACGGCTT TTTCAAAAAT ATGGTATTGA TAATCCTGAT ATGAATAAAT TGCAGTTTCA 3361 TTTGATGCTC GATGAGTTTT TCTAATCAGA ATTGGTTAAT TGGTTGTAAC ACTGGCAGAG 3421 CATTACGCTG ACTTGACGGG ACGGCGCAAG CTCATGACCA AAATCCCTTA ACGTGAGTTA 3481 CGCGTCGTTC CACTGAGCGT CAGACCCCGT AGAAAAGATC AAAGGATCTT CTTGAGATCC 3541 TTTTTTTCTG CGCGTAATCT GCTGCTTGCA AACAAAAAAA CCACCGCTAC CAGCGGTGGT 3601 TTGTTTGCCG GATCAAGAGC TACCAACTCT TTTTCCGAAG GTAACTGGCT TCAGCAGAGC 3661 GCAGATACCA AATACTGTTC TTCTAGTGTA GCCGTAGTTA GGCCACCACT TCAAGAACTC 3721 TGTAGCACCG CCTACATACC TCGCTCTGCT AATCCTGTTA CCAGTGGCTG CTGCCAGTGG 3781 CGATAAGTCG TGTCTTACCG GGTTGGACTC AAGACGATAG TTACCGGATA AGGCGCAGCG 3841 GTCGGGCTGA ACGGGGGGTT CGTGCACACA GCCCAGCTTG GAGCGAACGA CCTACACCGA 3901 ACTGAGATAC CTACAGCGTG AGCTATGAGA AAGCGCCACG CTTCCCGAAG GGAGAAAGGC 3961 GGACAGGTAT CCGGTAAGCG GCAGGGTCGG AACAGGAGAG CGCACGAGGG AGCTTCCAGG 4021 GGGAAACGCC TGGTATCTTT ATAGTCCTGT CGGGTTTCGC CACCTCTGAC TTGAGCGTCG 4081 ATTTTTGTGA TGCTCGTCAG GGGGGCGGAG CCTATGGAAA AACGCCAGCA ACGCGGCCTT 4141 TTTACGGTTC CTGGCCTTTT GCTGGCCTTT TGCTCACATG TT //