GT-CORE (public beta v1)

Glycosyltransferase Curated Online Resource for Enzymology

Family-organised sequence, structure, mechanism and substrate-specificity records for the CAZy glycosyltransferases

rxylt1

Danio rerio · Ribitol-5-phosphate xylosyltransferase 1 (EC 2.4.2.61)

GT110Model organism · annotation ≥ 4Fold GT-Aunknown

External resources

Identification and annotation

CAZy familyGT110 · CAZy entry
Gene symbolrxylt1
Synonyms / alternate names
  • tmem5
  • Transmembrane protein 5
  • UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltransferase
UniProt accessionQ08CD5
NCBI Gene ID557187
Source speciesDanio rerio
Taxonomic domainEukaryota
UniProt annotation level4

Function and localisation

Enzyme functionRibitol-5-phosphate xylosyltransferase 1 (EC 2.4.2.61)
Subcellular locationGolgi apparatus membrane

Structure and mechanism

Fold typeGT-A
Catalytic mechanismunknown
Cation dependenceNo
Oligomeric statenot curated
PDB structuresnot curated

Donor and acceptor specificity

Sugar nucleotide donorUDP-alpha-D-xylose
Donor CCD code(s)UDX
Acceptor substrate(s)3-O-[Rib-ol-P-Rib-ol-P-3-beta-D-GalNAc-(1->3)-beta-D-GlcNAc-(1->4)-(O-6-P-alpha-D-Man)]-Thr-[protein]
Acceptor CCD / GlycoCTnot curated

Protein sequences

Full protein sequence

434 aa
MRFFRRKIAIIVILAYAIFSLYAAYNVFFSKRVISRVHRVVKKGSVIIETGKAGEKEWNPWEEDERAHSVVVQKRRDAFRLYRDQAAKNRPKTYKVQIWGKAAIGLYLWEHILEGSLNPSDKSSQWREGEIQSGKIHFSFYTGPAVVQGHVPPDTDSVVLVLNGREQQKISYSVQWLQHVQSLIQARTISRVAVVLLGNEQCNNNWISPYLKRNGGFVDLLFLVYDSPWVNDKDIFQWPLGVATYRHFPVVTLSSQMVKKDRPYLCNFLGTIYKNSSRESLMNLLKQNNMEKDCLMHAREKWLPQETSDTSRQYQMALAQSDLTLCPVGVNSECYRIYEACAYGSVPVVEDVLTPGACAVGNRSPLRLLKDAGAPFIFLKDWKELPVILERERAMSQKEKTERRMRLLEWYSSFRQQMKDRFTEVLEENFFKIT

Catalytic domain sequence

335 aa
VQIWGKAAIGLYLWEHILEGSLNPSDKSSQWREGEIQSGKIHFSFYTGPAVVQGHVPPDTDSVVLVLNGREQQKISYSVQWLQHVQSLIQARTISRVAVVLLGNEQCNNNWISPYLKRNGGFVDLLFLVYDSPWVNDKDIFQWPLGVATYRHFPVVTLSSQMVKKDRPYLCNFLGTIYKNSSRESLMNLLKQNNMEKDCLMHAREKWLPQETSDTSRQYQMALAQSDLTLCPVGVNSECYRIYEACAYGSVPVVEDVLTPGACAVGNRSPLRLLKDAGAPFIFLKDWKELPVILERERAMSQKEKTERRMRLLEWYSSFRQQMKDRFTEVLEENF